Direct sequencing of the whole DNA from community of microorganism using Next Generation Sequencing technologies, produce sort reads with quality values in FASTA/FASTQ files. Processing of these files can be easily done with the help of FASTX-Toolkit which contains several command line tools. You can easily download this toolkit from the mentioned link. http://hannonlab.cshl.edu/fastx_toolkit/download.html
**** FASTX-Toolkit Quick Installation ****
1. First download libgtextutils same with the version of fastx you are going to download
extract using tar -xjf libgtextutils.tar.bz2
go into the directory using cd li......
./configure
make
make install
change directory cd ..
2. Download fastx_toolkit.tar.bz2
before run ./configure use command
export PKG_CONFIG_PATH=/usr/local/lib/pkgconfig:$PKG_CONFIG_PATH
./configure
make
make install
**** FASTX-Toolkit Quick Installation ****
1. First download libgtextutils same with the version of fastx you are going to download
extract using tar -xjf libgtextutils.tar.bz2
go into the directory using cd li......
./configure
make
make install
change directory cd ..
2. Download fastx_toolkit.tar.bz2
before run ./configure use command
export PKG_CONFIG_PATH=/usr/local/lib/pkgconfig:$PKG_CONFIG_PATH
./configure
make
make install
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